Add 1 publication citing PEPkit tools

[claude]

Summary

Monthly publications search (lookback: 18 months, window 2025-03-01 to 2026-09-01). One new, verified entry added.

Added

Authors	Year	Title	Journal	DOI	Evidence
Alberdi et al.	2026	EHItk: a toolkit for accessing Earth Hologenome Initiative data resources	Bioinformatics Advances	10.1093/bioadv/vbag199	cites:10.1093/bioinformatics/btad069

(This paper also cites the PEPhub seed, 10.1093/gigascience/giae033, but only one evidence value is recorded per entry.)

Candidates found and rejected

Channel A (OpenAlex citations of seed papers) — 41 candidates, 39 already listed, 1 added:
All other citing works returned by OpenAlex for the 7 seed DOIs were already present in docs/data/publications.yaml (matched by DOI or by normalized title, e.g. preprint/published pairs like the semantic-search-for-GEO paper and the Ewing sarcoma mevalonate-pathway paper).

Channel B (Europe PMC full-text queries) — 24 candidates, 21 already listed, 3 new but all rejected:

DOI	Title	Query matched	Reason rejected
10.1016/j.ccell.2026.02.010	A tumor-associated photoreceptor signature unifies distinct central nervous system malignancies	"PEPATAC"	Not open access; full text unavailable via Europe PMC or a preprint mirror, so the PEPATAC mention could not be confirmed as a software/Methods usage. Dropped per "when in doubt, exclude."
10.3390/ijms27020870	PepScorer::RMSD: An Improved Machine Learning Scoring Function for Protein-Peptide Docking	"PEPPRO"	False positive — unrelated peptide-docking ML tool, abstract confirms no relation to the PEPkit PEPPRO pipeline.
10.1016/j.gmg.2025.100080	Analysis of IL-6 and IL-1β Gene coding and study on specific clearance...	"PEPPRO"	False positive — unrelated blood-purification membrane paper, no connection to PEPPRO in abstract.

All other Channel B hits were already listed (matched by DOI).

No DOIs failed resolution; all candidates considered were checked against the existing dedup sets before being written here.