[fix] align cli with yaml

[guanqin-123]

The previous CLI option lacks in config settings in YAML; now it is aligned
The config file is first loaded by default, then if some CLI options exist, cli options will override the file config.
Coverage is willing to push 74.

[codecov]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 73.63%. Comparing base (e85d9c9) to head (a469f45).
⚠️ Report is 1 commits behind head on main.

Additional details and impacted files

@@           Coverage Diff           @@
##             main      #91   +/-   ##
=======================================
  Coverage   73.62%   73.63%           
=======================================
  Files          92       92           
  Lines       18993    18993           
=======================================
+ Hits        13984    13985    +1     
+ Misses       5009     5008    -1     

Flag	Coverage Δ
bab	47.56% <ø> (ø)
backend-float32	47.63% <ø> (ø)
backend-float64	47.67% <ø> (ø)
frontend	33.73% <ø> (+<0.01%)	⬆️
pipeline-fuzz	19.47% <ø> (+<0.01%)	⬆️
pipeline-verify	40.06% <ø> (+0.37%)	⬆️

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see 1 file with indirect coverage changes

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[yuleisui]

We will continue to do the following refactoring
(1) reduce the code size for three components (frontend, pipeline and backend)
(2) make a single config.yaml under each of these three components to include all possible configurations (from CLIs)