Basic SerialEM grid square mag image analyser#812
Open
d-j-hatton wants to merge 2 commits into
Open
Conversation
Codecov Report❌ Patch coverage is Additional details and impacted files@@ Coverage Diff @@
## main #812 +/- ##
==========================================
- Coverage 52.39% 52.34% -0.06%
==========================================
Files 97 97
Lines 10461 10479 +18
Branches 1381 1385 +4
==========================================
+ Hits 5481 5485 +4
- Misses 4691 4705 +14
Partials 289 289 🚀 New features to boost your workflow:
|
stephen-riggs
approved these changes
Jun 3, 2026
Contributor
stephen-riggs
left a comment
There was a problem hiding this comment.
Looks fine to me. Are you intending to save the files into an Images-Disc directory like EPU does then?
… so need to return early when finding the source directory for the fractions
Contributor
Author
oops, thanks for the catch, no I'm not. fixed now |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Add basic functionality to trigger SmartEM events when grid square mag images are seen from a SerialEM workflow (assumes that the stem of the file name is the UUID associated with the grid square)