Describe the bug
I'm using the yq GitHub Actions action to set a project version in a pyproject.toml. When I do this, the resulting file is missing a large chunk, the rest is rearranged, and it results in failures down the line.
Version of yq: GitHub Action @4
Operating system: ubuntu-latest on GitHub Actions runner
Installed via: GitHub Action
Input TOML
pyproject.toml:
[tool.poetry]
name = "my-project"
version = "0.0.0.0"
description = ""
authors = ["Your Name <you@example.com>"]
readme = "README.md"
[tool.poetry.dependencies]
python = ">=3.10,<3.13"
fastapi = "^0.115.0"
uvicorn = "^0.30.6"
python-dotenv = "^1.0.1"
pydantic-settings = "^2.5.2"
python-json-logger = "^2.0.7"
httpx = "^0.27.2"
langchain = "^0.3.0"
langchain-openai = "^0.2.0"
langchain-community = "^0.3.0"
itsdangerous = "^2.2.0"
SQLAlchemy = "^2.0.35"
PyMySQL = "^1.1.1"
pytest-sqlalchemy = "^0.2.1"
cryptography = "^44.0.1"
alembic = "^1.13.3"
redis = "^5.1.0"
langchain-redis = "^0.1.0"
motor = "^3.6.0"
langchain-mongodb = "^0.2.0"
importlib-metadata = "8.4.0"
ddtrace = "^2.14.4"
toml = "^0.10.2"
aiomysql = "^0.2.0"
aiosqlite = "^0.20.0"
aiohttp = ">=3.11.0,<3.11.13"
aiokafka = "^0.12.0"
confluent-kafka = "^2.6.0"
astroid = "^3.3.6"
atlassian-python-api = "^3.41.16"
langfuse = "^2.56.1"
pyinstrument = "^5.0.0"
deepeval = "^2.1.1"
pyjwt = "^2.10.1"
jsonschema = "^4.17.3"
openapi-schema-validator = "^0.4.1"
pytest-celery = "^1.2.0"
langdetect = "^1.0.9"
celery = { extras = ["asyncio"], version = "^5.4.0" }
pydantic = { extras = ["email"], version = "^2.10.1" }
[tool.poetry.group.dev.dependencies]
black = "^24.10.0"
pylint = "^3.3.1"
ruff = "^0.6.8"
flake8 = "^7.1.1"
flake8-spellcheck = "^0.28.0"
pre-commit = "^4.0.1"
codespell = "^2.2.5"
pytest-asyncio = "^0.24.0"
aiomysql = "^0.2.0"
pytest = "^8.3.3"
pytest-cov = "^6.0.0"
coverage-badge = "^1.1.2"
sqlalchemy = { extras = ["asyncio"], version = "^2.0.36" }
[tool.black]
line-length = 88
[build-system]
requires = ["poetry-core"]
build-backend = "poetry.core.masonry.api"Command
The command you ran:
- name: Update version in pyproject.toml
uses: mikefarah/yq@v4
with:
cmd: |
yq -i '.tool.poetry.version = "${{ github.ref_name }}"' pyproject.tomlActual behaviour
[tool.poetry]
name = "apim-bot-server"
version = "12.6.0.10"
description = ""
authors = ["Your Name <you@example.com>"]
readme = "README.md"
group = { dev = { dependencies = { black = "^24.10.0", pylint = "^3.3.1", ruff = "^0.6.8", flake8 = "^7.1.1", flake8-spellcheck = "^0.28.0", pre-commit = "^4.0.1", codespell = "^2.2.5", pytest-asyncio = "^0.24.0", aiomysql = "^0.2.0", pytest = "^8.3.3", pytest-cov = "^6.0.0", coverage-badge = "^1.1.2", sqlalchemy = { extras = ["asyncio"], version = "^2.0.36" } } } }
[tool.black]
line-length = 88
[build-system]
requires = ["poetry-core"]
build-backend = "poetry.core.masonry.api"The sections have been collapsed, and the [tool.poetry.dependencies] section is completely gone.
Expected behaviour
[tool.poetry]
name = "my-project"
version = "12.6.0.11"
description = ""
authors = ["Your Name <you@example.com>"]
readme = "README.md"
[tool.poetry.dependencies]
python = ">=3.10,<3.13"
fastapi = "^0.115.0"
uvicorn = "^0.30.6"
python-dotenv = "^1.0.1"
pydantic-settings = "^2.5.2"
python-json-logger = "^2.0.7"
httpx = "^0.27.2"
langchain = "^0.3.0"
langchain-openai = "^0.2.0"
langchain-community = "^0.3.0"
itsdangerous = "^2.2.0"
SQLAlchemy = "^2.0.35"
PyMySQL = "^1.1.1"
pytest-sqlalchemy = "^0.2.1"
cryptography = "^44.0.1"
alembic = "^1.13.3"
redis = "^5.1.0"
langchain-redis = "^0.1.0"
motor = "^3.6.0"
langchain-mongodb = "^0.2.0"
importlib-metadata = "8.4.0"
ddtrace = "^2.14.4"
toml = "^0.10.2"
aiomysql = "^0.2.0"
aiosqlite = "^0.20.0"
aiohttp = ">=3.11.0,<3.11.13"
aiokafka = "^0.12.0"
confluent-kafka = "^2.6.0"
astroid = "^3.3.6"
atlassian-python-api = "^3.41.16"
langfuse = "^2.56.1"
pyinstrument = "^5.0.0"
deepeval = "^2.1.1"
pyjwt = "^2.10.1"
jsonschema = "^4.17.3"
openapi-schema-validator = "^0.4.1"
pytest-celery = "^1.2.0"
langdetect = "^1.0.9"
celery = { extras = ["asyncio"], version = "^5.4.0" }
pydantic = { extras = ["email"], version = "^2.10.1" }
[tool.poetry.group.dev.dependencies]
black = "^24.10.0"
pylint = "^3.3.1"
ruff = "^0.6.8"
flake8 = "^7.1.1"
flake8-spellcheck = "^0.28.0"
pre-commit = "^4.0.1"
codespell = "^2.2.5"
pytest-asyncio = "^0.24.0"
aiomysql = "^0.2.0"
pytest = "^8.3.3"
pytest-cov = "^6.0.0"
coverage-badge = "^1.1.2"
sqlalchemy = { extras = ["asyncio"], version = "^2.0.36" }
[tool.black]
line-length = 88
[build-system]
requires = ["poetry-core"]
build-backend = "poetry.core.masonry.api"Additional context
Bizarrely, this exact thing works as expected when I run it on my local machine with yq 4.53.2.
Describe the bug
I'm using the yq GitHub Actions action to set a project version in a
pyproject.toml. When I do this, the resulting file is missing a large chunk, the rest is rearranged, and it results in failures down the line.Version of yq: GitHub Action
@4Operating system: ubuntu-latest on GitHub Actions runner
Installed via: GitHub Action
Input TOML
pyproject.toml:
Command
The command you ran:
Actual behaviour
The sections have been collapsed, and the
[tool.poetry.dependencies]section is completely gone.Expected behaviour
Additional context
Bizarrely, this exact thing works as expected when I run it on my local machine with yq 4.53.2.