celios/setup.py at main · druglogics/celios · GitHub

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from pathlib import Path

from setuptools import find_packages, setup


ROOT = Path(__file__).parent
README = ROOT / "README.md"

setup(
	name="celios",
	version="0.1.0",
	description="CELIOS: extract omics data into integrated activity datasets for Boolean model calibration. Part of the DrugLogics and the TRAFIKK pipelines.",
	long_description=README.read_text(encoding="utf-8"),
	long_description_content_type="text/markdown",
	author='Viviam Solangeli Bermúdez Paiva',
	author_email='viviambermudez@gmail.com',
    license="MIT",
	packages=find_packages(where="src"),
	package_dir={"": "src"},
	include_package_data=True,
	python_requires=">=3.8",
	install_requires=[
		"pandas>=1.0.0",
		"pyyaml>=5.0.0",
	],
	extras_require={
		"dev": [
			"pytest>=6.0.0",
		],
	},
	classifiers=[
		"Development Status :: 4 - Beta",
		"License :: OSI Approved :: MIT License",
		"Programming Language :: Python :: 3",
		"Programming Language :: Python :: 3.8",
		"Programming Language :: Python :: 3.9",
		"Programming Language :: Python :: 3.10",
		"Programming Language :: Python :: 3.11",
		"Programming Language :: Python :: 3.12",
		"Intended Audience :: Science/Research",
		"Topic :: Scientific/Engineering :: Bio-Informatics",
	],
	keywords="omics cell-lines boolean-models druglogics pipeline",
	entry_points={
		"console_scripts": [
			"celios=celios.cli:main",
		]
	},
	project_urls={
		"Homepage": "https://github.com/druglogics/celios",
		"Source": "https://github.com/druglogics/celios",
		"Issues": "https://github.com/druglogics/celios/issues",
	},
)