Examples

All runnable scripts are in the examples/ directory. Generate every output at once:

cd examples && python generate_all.py

Index

#	File	Description
01	`01_basic_network.py`	Circular layout with 8 nodes - the simplest starting point
02	`02_focus_layout.py`	Hub-and-spoke: one dominant center node, rest on a ring
03	`03_bilayer_layout.py`	Bilayer: inner and outer concentric rings
04	`04_weighted_edges.py`	`BubbleGraph.from_weighted_edges()` shorthand constructor
05	`05_adjacency_matrix.py`	Build a graph from an adjacency matrix
06	`06_custom_style.py`	Custom `Style` object with edge tiers and colour overrides
07	`07_liana_preset.py`	LIANA cell-cell communication preset
08	`08_subgraph_filter.py`	Subgraph extraction and edge weight filtering
09	`09_multipanel.py`	Multi-panel time series in a single figure
10	`10_merge_nodes.py`	Merging nodes by group label
11	`11_citation_network.py`	Bibliographic citation network from BibTeX
12	`12_dependencies.py`	Software dependency tree from `requirements.txt`
13	`13_pipeline.py`	Data pipeline / ETL flow
14	`14_webgraph.py`	Web page link graph
15	`15_social_network.py`	Social network with community detection